The genetic code of any organisms comprises of three nucleotides, also – Savvy Essay Writers | savvyessaywriters.net
The genetic code of any organisms comprises of three nucleotides, also – Savvy Essay Writers | savvyessaywriters.net
The genetic code of any organisms comprises of three nucleotides, also
hwk3.seq
AGCGAGATGGGAAAGATCACCTTCTTCGAGGACCGAGGCTTCCAGGGC
1. The genetic code of any organisms comprises of three nucleotides, also known as codon. Many gene-finding programs rely on translating a piece of DNA sequence in all possible reading frames and looking for the longest non-interrupted region of translation. Please develop a Java program to read in a piece of DNA sequence from a sequence file (hwk3.seq) (alternatively you can use the getRandomSeq(long) method of the RandomSeq class to generate a piece of DNA sequence, see week#4 conference), and then print out all the codons in three forward reading frames. Design a method called codon() that can be used to find all the codons from three reading frames. The method will take in an argument, the reading frame (1, 2, or 3), and return an array or ArrayList with all the codons. All the codons should have three nucleotides, please discard the last one if it does not have three nucleotides. Below is a sample output of the program: (5 points)
Please enter the file name contains the DNA sequence:
hwk3.seq
The DNA sequence is:
TCAGCGAGATGGGAAAGATCACCTTCTTCGAGGACCGAGGCTTCCAGGGC
Reading frame #1 codons are:
TCA GCG AGA TGG GAA AGA TCA CCT TCT TCG AGG ACC GAG GCT TCC AGG
Reading frame #2 codons are:
CAG CGA GAT GGG AAA GAT CAC CTT CTT CGA GGA CCG AGG CTT CCA GGG
Reading frame #3 codons are:
AGC GAG ATG GGA AAG ATC ACC TTC TTC GAG GAC CGA GGC TTC CAG GGC
